Author

Bakhyt T Matkarimov

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Open access Aug 2026

KazRNA-Pipe-GPU-Accelerated, Reproducible Nextflow Workflow for Integrated Bulk and Single-Cell Transcriptomic Profiling

KazRNA-Pipe is presented, an open-source Nextflow v26.6 workflow processing both bulk and single-cell RNA sequencing (RNA-seq) within a unified Singularity-containerized environment with graphics processing unit (GPU) acceleration through the RAPIDS ecosystem.

M. Ashimgaliyev, Beimbet Daribayev, A. Zhumadillayeva et al. · BioMedInformatics · 0 citations