Open access
Aug 2026
BatchRefiner: fast, significant improvement in batch integration of single-cell embeddings with ensemble refinement
This work introduces ensemble refinement for scRNA-seq and scATAC-seq embeddings, inspired by ensemble methods from statistical machine learning, and implements BatchRefiner, a fast post-processing tool to enhance batch integration.
Daniel E. Schäffer, Helen Kang, E. D. Aksu et al.
· bioRxiv · 0 citations