Open access
Oct 2026
The ModelSEED Biochemistry Database, 2026 update: grading multi-source thermodynamics
A. Freiburger, José P. Faria, Rui-Jie Zhu et al.
· bioRxiv · 0 citations
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AI Networking Cookbook: Practical recipes for AI-assisted network automation and development
AI Networking Cookbook: Practical recipes for AI-assisted network automation and development
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Open access
Sep 2026
Accessing Enzyme Kinetic Data and Prediction Methods at Scale
OpenKinetics Predictor (predictor.openkinetics.org), an open-source platform integrating thirteen kinetic parameter prediction methods accessible via one interface, is presented, finding inter-predictor agreement varies with metabolic context and data availability.
Saleh Alwer, Hugues Escoffier, Karim Taha et al.
· bioRxiv · 0 citations
Open access
Jul 2026
Engineered Pseudomonas putida reconfigures metabolic fluxes to support energy demands during muconate bioproduction from lignin-related aromatics
Pro proteomics, metabolomics, and 13C-fluxomics are applied to quantitatively compare central carbon and energy metabolism in wild-type P. putida and a muconate-producing strain for improved bioproduction from renewable feedstocks.
R. Wilkes, P. Suthers, A. Borchert et al.
· bioRxiv · 3 citations