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Sponsored AI Networking Cookbook: Practical recipes for AI-assisted network automation and development AI Networking Cookbook: Practical recipes for AI-assisted network automation and development

Author

Christopher D. R. Wyatt

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Open access Oct 2026

EXCON: a scalable, reproducible Nextflow pipeline for CAFE-based gene EXpansion and CONtraction analysis

ExCON is an automated, Eco-Flow community-developed Nextflow pipeline that integrates NCBI genome download, annotation quality and format pre-processing, orthologous gene family identification, orthologous gene family identification, ultrametric tree formatting, birth-death modelling, and GO enrichment analysis into a...

Christopher D. R. Wyatt, Fernando Duarte, Alexandra Cerqueira de Araujo et al. · 0 citations
Open access Aug 2026

nf-core/genomeqc: a best-practice pipeline for comparing genome and assembly quality

The rapid growth in publicly available genome assemblies has made selecting genomes suitable for downstream analyses increasingly challenging. Differences in assembly and annotation quality can influence gene completeness, duplication rates, contiguity, repeat representation, and other characteristics. Assessing genome...

Christopher D. R. Wyatt, Fernando Duarte Frutos, Stephen D. Turner et al. · 0 citations

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