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Author

Dani Korpela

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Open access Aug 2026

PepGen: conditional generation of peptides for MHC binding

PepGen provides scalable, motif-constrained MHC II peptide redesign and de novo generation, validated through thorough benchmarks and functional assays.

Dani Korpela, A. Dumitrescu, Martin Stražar et al. · 0 citations
Open access Aug 2026

Peptide-HLA II interaction prediction for post-translationally modified peptides

PepChem, a deep learning model utilizing novel, molecular-level peptide representations that enable predictions for sidechain modifications, bridges the critical gap in PTM-aware immune recognition prediction, with immediate applications in autoimmunity, cancer, and infectious disease.

A. Dumitrescu, Dani Korpela, Adrian M. Bebenek et al. · 0 citations

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