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Author

E. D. Akten

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Oct 2026

Targeting the allosteric mechanism of methicillin-resistant Staphylococcus aureus pyruvate kinase: From inhibitor discovery to network reorganization.

Findings support a model in which the functional effects of putative allosteric ligands on S. aureus PK may be associated with site-dependent reorganization of its residue communication network.

Merve Yuce, Ipek Turkmenoglu, G. Kurtuluş et al. · 0 citations
Aug 2026

Systematic identification of species-specific allosteric sites in bacterial glycolytic enzymes: Hexokinase, phosphoglucose isomerase, phosphoglycerate kinase, and enolase.

Across all four glycolytic enzymes, interface-localized pockets consistently emerged as promising candidate regulatory regions, suggesting that protein-protein interfaces may represent valuable targets for allosteric modulation.

Defne Alnıgeniş, Florihana Brina, Ilknur Kocal et al. · 1 citation
Open access Jun 2026

Structural feature-based machine learning benchmarking for protein interface prediction.

Accurate prediction of protein-protein interaction interfaces is critical for understanding molecular recognition and guiding therapeutic design. This study presents a comprehensive machine learning pipeline for predicting interface residues in permanent homodimeric protein complexes. Using a curated dataset of 1311 ho...

Tayyip Topuz, Z. Erdem, Halil Bisgin et al. · 0 citations

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