Skip to content

Author

E. Khodadadi

2 papers indexed here

We haven’t gathered this author’s papers yet. Follow them and we’ll fetch their work.

Not the right person? Other researchers publish under this name.

Open access Jul 2026

Interplay Between Cholesterol Concentration and Membrane Curvature in Liposomes Revealed by Molecular Dynamics Simulations

Liposomes are widely used as model membranes and nanoscale drug delivery systems, where cholesterol plays a key role in regulating bilayer structure and dynamics. However, how cholesterol concentration influences the structure and dynamics of liposome and how this influence is dependent on membrane curvature are not fully understood at the molecular level. In this work, coarse-grained molecular dynamics simulations using the MARTINI force field were employed to examine the concentration-dependent behavior of cholesterol in planar and curved membranes composed of cholesterol and unsaturated phospholipids, namely DOPC. More specifically, a planar lipid bilayer and an approximately 50-nm liposome were simulated to represent two extreme limits of small and large curvature, respectively. Increasing cholesterol concentration led to thicker membranes and reduced solvent exposure, consistent with cholesterol’s condensing effect. Membrane curvature enhanced interleaflet coupling and increased tail interdigitation relative to planar systems. Notably, DOPC flip-flop rate in spherical bilayers exhibited a non-monotonic dependence on cholesterol content, reflecting a balance between curvature-induced packing stress and cholesterol-driven ordering. These findings provide molecular-level insight into how cholesterol and curvature together shape the structure and dynamics of unsaturated lipid bilayers.

E. Khodadadi, Mortaza Derakhshani-Molayousefi, E. Khodadadi et al. · 1 citation
Open access Aug 2026

Cholesterol-Dependent Structure and Dynamics of Curved Lipid Vesicles Revealed by Dry MARTINI Simulations

Cholesterol is a key regulator of membrane structure and dynamics, yet its effects on large curved vesicles under implicit-solvent coarse-grained conditions remain incompletely understood. Equilibrating large Dry MARTINI vesicles is challenging because transient membrane deformations can arise during the early stages of equilibration. Here, we developed a leaflet-specific restrained-equilibration protocol that preserves vesicle geometry while allowing local lipid relaxation. All restraints were removed before production simulations, and all reported results were obtained from unbiased trajectories. Using this protocol together with the Dry MARTINI force field and the TS2CG membrane builder, we simulated ∼50 nm DOPC vesicles containing 0–40 mol% cholesterol in three independent 20 µs production simulations for each membrane composition. Increasing cholesterol concentration produced a consistent structural reorganization of the membrane, characterized by increased membrane thickness and lipid-tail ordering, and decreased species-specific Voronoi area per lipid, lipid-tail interdigitation, solvent-accessible surface area, and vesicle shape anisotropy. Cholesterol flip-flop increased progressively with cholesterol concentration, whereas DOPC flip-flop exhibited a reproducible non-monotonic dependence with a maximum near 20 mol% cholesterol. Comparison with our previous explicit-solvent MARTINI simulations showed that the major cholesterol-dependent structural trends were preserved across both solvent representations, whereas species-specific lipid packing, lipid-tail interdigitation, and the absolute magnitude of lipid flip-flop remained sensitive to the solvent representation. Overall, Dry MAR-TINI combined with the restrained-equilibration protocol provides an efficient framework for studying large curved cholesterol-containing vesicles.

E. Khodadadi, E. Khodadadi, Mahmoud Moradi · 0 citations