Cell detection, segmentation, and classification are essential for analyzing tumor microenvironments (TME) on hematoxylin and eosin (H&E) slides. Existing methods suffer from poor performance on understudied cell types (rare or not present in public datasets) and limited cross-domain generalization. To address these sh...
Benjamin Adjadj, Pierre-Antoine Bannier, Guillaume Horent et al.· Journal of Pathology Informa...· 15 citations· ⚡1
The Botanic1 family of gLMs designed for plant research is presented, which operates reliably on sequences from hundreds of base pairs up to 128 kbp, and integrates Botanic1 as a specialised genomic layer callable by a generalist large language model (LLM) agent, illustrating how such hybrid systems could accelerate pl...
A. Barozet, V. Cabeli, Jean Ogier du Terrail et al.· bioRxiv· 0 citations
The development of climate-resilient crops would be greatly accelerated by models able to reason directly over plant genomic sequences and to pinpoint trait-associated regions or loci. Anticipating the impact of DNA base changes (variants) remains challenging, and understanding regulatory mechanisms is still an active...
A. Barozet, V. Cabeli, J. D. du Terrail et al.· bioRxiv· 0 citations
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