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Open access Oct 2026

Topology-adjusted knockout (TAKO): interpretable in silico single-gene knockout ranking on wild-type single-cell gene regulatory networks

Predicting single-gene knockout effects from wild-type single-cell RNA-seq data remains challenging when perturbation experiments are costly and existing approaches require knockout-specific model training. Here we introduce Topology-Adjusted Knockout (TAKO), a computationally efficient WT-only framework for single...

Hao Wang, Koji Oba · 0 citations

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