Open access
Aug 2026
Evaluating Graph Neural Network Architectures for Multi-Omics Cancer Subtyping using Methylation and Gene Expression Profiles
A benchmarking study on multiple GNNs on a Protein-Protein Interaction (PPI) network for Kidney Renal Clear Cell Carcinoma and Breast cancer subtype prediction, performing an in-depth investigation of architectures, incorporating skip connections and various data modalities.
Julia Schirmacher, M. C. Maurer, J. M. Metsch et al.
· bioRxiv · 0 citations