Open access
Jul 2026
HELM-BERT: Topology-Aware Representations for Chemically Modified Peptides
These findings suggest that pretraining directly on notation that makes structural constraints explicit offers a transferable strategy for biomolecular modalities that fall between small-molecule chemistry and protein sequence.
Seungeon Lee, Takuto Koyama, Itsuki Maeda et al.
· Journal of Chemical Informat... · 0 citations