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Author

Jennifer K. Grenier

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Review Open access Sep 2026

From Prompt to Pipeline: A Comparative Evaluation of Large Language Model Coding Agents for Reproducible Bioinformatics Pipeline Construction

The results suggest that current coding agents can accelerate scaffolding, documentation, and routine implementation, but they do not eliminate the need for expert review in bioinformatics workflow construction.

Paul R. Munn, Jennifer K. Grenier · 0 citations
Open access Aug 2026

BLink-seq delivers population-scale haplotypes without long reads: a scalable framework for non-model genomics

BLink-seq is presented, a novel Haplotagging method that is compatible with standard short-read next-generation sequencing platforms, is locally reproducible with low-cost reagents, and is scalable for high-throughput sample processing.

Azwad R Iqbal, Pavel V. Dimens, J. Rick et al. · 0 citations

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