Poplar (Populus spp.) is a model for tree biology and a platform for engineering woody biomass, biofuels, biomaterials, and bioproducts. Many relevant traits depend on tissue position, developmental stage, and cell type, yet these spatial relationships are difficult to recover from bulk or single-cell transcriptomes. H...
Zi-Liang Luo, Anita Giabardo, Joshua C. Wood et al.· bioRxiv· 0 citations
Geophytes are plants that produce underground storage organs such as tubers, rhizomes, and bulbs, to facilitate asexual reproduction and withstand a myriad of environmental challenges. While the potato (Solanum tuberosum L.) serves as the primary model for studying tuberization, the genetic mechanisms encoding this tra...
Julia Brose, Dionne Martin, Yi-Wen Wang et al.· Proceedings of the National...· 0 citations
Time-course RNA-seq data from leaf protoplasts of Arabidopsis, maize, and poplar is generated, to systematically characterize global transcriptional dynamics across species and facilitate the systematic identification of stress-associated cell states in single-cell transcriptomic data.
