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Junjie Shen

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Open access Jul 2026

DFCE-KanT: predicting spatial gene expression from histology images via contrastive learning

Abstract Motivation Spatial transcriptomics (ST) can quantitatively characterize the spatial molecular profile in tissues and yet is costly to be applied at a large scale. One viable, a low-cost alternative would be to directly predict spatial gene expression from routine hematoxylin eosin (H&E) stained WSIs. Yet, the...

Fang Li, Pengyu Wang, Junjie Shen et al. · 0 citations

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