Author

Ke Yuan

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Open access Aug 2026

Respiratory pathogen epidemiology in children under 5 years hospitalized with acute respiratory infections in Qingdao, China: a retrospective, single-center, repeated cross-sectional surveillance study

Background During the coronavirus disease 2019 (COVID-19) pandemic, non-pharmaceutical interventions (NPIs) reduced the transmission of severe acute respiratory syndrome coronavirus 2 (SARS‑CoV‑2) while simultaneously affecting the prevalence of respiratory pathogens to varying degrees. Currently, epidemiological chara...

Ying-Yue Sun, Yu-Ping Yang, Qian-Nan Jiang et al. · Translational Pediatrics · 0 citations

Open access Jul 2026

Protein language models learn underlying mutation biases alongside fitness landscapes

A parameter sweep is implemented to explicitly couple empirical nucleotide mutational supply from PLM-assessed amino acid substitution pseudo-probabilities across evolutionary forecasting tasks and finds that base PLMs implicitly learn generic nucleotide-level mutational constraints, an effect strongly amplified by vir...

O. MacLean, Kieran D. Lamb, Spyros Lytras et al. · bioRxiv · 0 citations