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Sponsored AI AM CLAUDE, A Beginner's Guide: Learn the basics of working with AI AI AM CLAUDE, A Beginner's Guide: Learn the basics of working with AI

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Li-Feng Qiao

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#artificial intelligence Preprint Nov 2026

Auto-Research Agent on MSA Organization to Improve Protein-Protein Complex Structure Prediction

Protein-complex structure prediction with AlphaFold 3 depends on MSA content, depth, and cross-chain pairing. Current pipelines apply uniform recipes, typically maximizing depth and pairing by species, yet even whether cross-chain pairing helps AF3 remains contested. We show that the value of both depth and pairing is...

Zi-Lu Zhang, Jing Bao, Li-Feng Qiao et al. · 0 citations

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