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My-Diem Nguyen Pham

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Open access Aug 2026

CALFP-MHC: Interpretable Pan-Allelic Prediction of Peptide-MHC Binding and Presentation Using Chemically Grounded Fingerprints and Contrastive Learning

CALFP-MHC demonstrates that grounding residue representations in molecular chemistry, rather than sequence symbols alone, improves both robustness and interpretability in peptide–MHC binding prediction.

My-Diem Nguyen Pham, T. Ho, H. Nguyen et al. · bioRxiv · 0 citations