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Nan Yu

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Preprint Aug 2026

Inter-Residue Geometry Attention for Antibody-Specific Epitope Prediction

Local-Frame 3D Rotary Position Encoding (LF3DRoPE), which expresses inter-residue displacements in backbone-defined local frames and injects them directly into rotary attention, preserves continuous directional geometry while ensuring invariance to global $\mathrm{SE}(3)$ transformations.

Chuanliu Fan, Nan Yu, Junjie Wu et al. · 0 citations