Author

Nicola Bordin

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Open access Sep 2026

ContrasTED: contrastive domain embeddings for scalable remote homology classification

ContrasTED uses CATH-supervised center-contrastive learning to project structure-aware embeddings into a domain-level metric space for nearest-centroid superfamily assignment, which separates superfamilies while retaining structural information below 20% sequence identity.

David Miller, Nicola Bordin, Janusan Jeyananthan et al. · bioRxiv · 0 citations

Open access Aug 2026

Structural plasticity drives convergent evolution and functional diversification of GNAT polyamine acetyltransferases.

A characterization of a large subset of PAAT enzymes, including their likely oligomeric states, functional site properties, and experimental functions is presented, including their likely oligomeric states, functional site properties, and experimental functions.

J. Roca-Martínez, Hazel N. Leiva Martel, Jialin Yin et al. · Structure · 0 citations