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Peng Xu

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Preprint Aug 2026

Validating LLM-Modernized Scientific Software Through Differential Fault Injection

Large language model (LLM) agents are increasingly used to modernize the legacy Fortran underlying production scientific software, but validation of these transformations emphasizes nominal executions and may not test whether a modernization preserves the original code's response to faults, perturbations, and reduced precision. We present a differential fault-injection validation method: a harness instruments the shared self-consistent-field driver of GAMESS at twelve sites and applies identical, deterministic faults to the original and LLM-modernized implementations, isolating the converted integral kernels. Across more than 2,200 runs, transient-fault absorption costs match a contraction-based model (predicted slopes 0.74 and 1.49 iterations per bit; measured 0.82 and 1.50), persistent perturbations halve final-energy error per additional bit, and the campaigns expose phase-dependent parallel deadlocks and false convergence under reduced precision. The original and modernized kernels agree in all 200 paired injections, and a measurement-guided synchronization change composes with the modernization, matching in all 40 pairs.

Evan Coleman, Yuzhong Shen, M. Sosonkina et al. · 0 citations
Preprint Jul 2026

Uni-XAS: Alignment-Driven Bidirectional Multimodal Learning for X-ray Absorption Spectroscopy

Uni-XAS is presented, a unified benchmark and learning framework that reframes bidirectional XAS modeling as a cross-modal alignment and conditional generation problem, and introduces Permutation-Rectified Flow Matching, which integrates type-wise optimal transport into a continuous generative flow to provide a principled solution to ligand permutation ambiguity without relying on heavy high-order equivariant architectures.

Suyang Zhong, Yuhao Zhao, Boying Huang et al. · 0 citations