OpenKinetics Predictor (predictor.openkinetics.org), an open-source platform integrating thirteen kinetic parameter prediction methods accessible via one interface, is presented, finding inter-predictor agreement varies with metabolic context and data availability.
Saleh Alwer, Hugues Escoffier, Karim Taha et al.· bioRxiv· 0 citations
Predicting enzyme kinetics directly from sequence remains a central challenge in computational biology, particularly in resolving the effects of mutations at catalytically essential residues. Existing models frequently overlook the functional consequences of such perturbations, defaulting to wild-type predictions eve...
Karuna Anna Sajeevan, A. Osinuga, B. Arunraj et al.· PNAS Nexus· 1 citation
This study investigates the effects of pBHR1’s native mobilization protein, MobV, on the retention of pBBR1 origin plasmids in R. palustris, and provides design principles for constructing stable, high-performing vectors in non-model gram-negative hosts.
M. Kathol, Quin Barton, Cheryl M. Immethun et al.· Microbiology spectrum· 0 citations
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