In this study, a series of indolyl hydrazone derivatives (
5–10
) were designed and synthesized from 2,4‐dimethoxybenzaldehyde (DMBA) (
1
) as potential chemotherapeutic agents. The structures of the synthesized compounds were confirmed by elemental analysis, FT‐IR, 1D, and 2D NMR spectroscopy, and high‐resolution mass spectrometry (HRMS). Their cytotoxic activities were evaluated against human breast (MCF‐7), liver (HepG2), and colorectal (DLD‐1) cancer cell lines. All compounds exhibited cytotoxic effects at micromolar concentrations, with IC
50
values ranging from 8.97–26.07 µM for MCF‐7, 22.50–70.99 µM for HepG2, and 5.93–66.31 µM for DLD‐1 cells. Compound
10
demonstrated the strongest activity against MCF‐7 and DLD‐1 cells, with IC
50
values of 8.97 ± 0.31 and 5.93 ± 0.11 µM, respectively. Compound
7
showed the highest antiproliferative activity against HepG2 cells (22.50 ± 1.23 µM), exceeding the activity of cisplatin (37.27 ± 2.42 µM). Molecular docking studies revealed favorable binding affinities of the most active compounds (
7
and
10
) toward selected targets. In addition, in silico ADME‐toxicity analyses predicted acceptable physicochemical and pharmacokinetic properties, supporting the potential of these derivatives as promising anticancer candidates.
The results indicated that the compounds possess high lipophilicity but show limited bioavailability due to low solubility and none of the compounds were predicted to cross the blood–brain barrier, which limits their potential for direct effects on the central nervous system.