Author

Sizhe Zhang

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Open access Aug 2026

MARD-Mol: a hybrid autoregressive-diffusion paradigm for coarse-grained molecular modeling

MARD-Mol is proposed, a hybrid AR-diffusion framework based on motif-inspired units that reformulate property optimization into an iterative “diagnose-and-repair” process, enabling targeted optimization of defective motifs while preserving the global scaffold.

Sizhe Zhang, G. Luo, Wei Fan et al. · Bioinformatics · 0 citations

Open access Aug 2026

AbAgKer: a unified semi-supervised framework for antigen-antibody binding affinity and kinetics prediction

This work designs a biological prior-guided feature fusion framework that integrates pseudo-structural epitope knowledge and CDR-specific attention mechanisms via a mixture-of-experts architecture to effectively capture complex binding landscapes in antibody screening and drug residence time analysis.

G. Luo, Junkai Wang, Sizhe Zhang et al. · Bioinformatics · 0 citations