SketchDNA: A GUI-Enabled Toolkit for Multiscale Modeling of Topological DNA Structures
A GUI-enabled topological DNA design tool, SketchDNA (SDNA), that facilitates a user-friendly interface to create all-atom (AA) and coarse-grained (CG) models of DNA structures with tunable topological parameters and broadens the applications of MD simulations by enabling in-situ characterization of the biophysical pro...