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Takuto Koyama

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Open access Jul 2026

HELM-BERT: Topology-Aware Representations for Chemically Modified Peptides

These findings suggest that pretraining directly on notation that makes structural constraints explicit offers a transferable strategy for biomolecular modalities that fall between small-molecule chemistry and protein sequence.

Seungeon Lee, Takuto Koyama, Itsuki Maeda et al. · 0 citations