Background The rumen microbiome is shaped by numerous external factors such as diet and host genetics, but these drivers act through internal microbial dynamics, including cross-feeding, substrate competition, and threshold-driven community shifts that give rise to non-linear interactions among microbes. Standard net...
Wan-Xin Lai, Andy O. Leu, TR Hvidsten et al.· Open Research Europe· 0 citations
Whole genome duplication (WGD) events during early vertebrate evolution may have promoted phenotypic innovation by expanding the genetic material for functional diversification. However, their ancient origins obscure how gene regulation evolved during rediploidization, the process that generates duplicate genes and reg...
Marie-Odile Baudement, D. Morata, G. Gillard et al.· Nature Ecology & Evolution· 0 citations
It is shown that a computational method designed for multi-omic analysis in eukaryotes can be leveraged to integrate and analyze five layers of holo-omic data from porcine hosts and their gut microbiomes, and predicts new leads for understanding host-microbiome symbiosis.
J. Merkesvik, J. Langa, C. Pietroni et al.· Microbiology spectrum· 0 citations
The root cold response is species specific in identity and timing, yet underlain by a conserved co-expression core, underlain by a conserved co-expression core.
Tuuli Aro, Elena M. van Zalen, Alexander Vergara et al.· bioRxiv· 0 citations
Comparing Norway spruce and Scots pine, two species separated by a deep evolutionary divergence, it is shown that the genes whose co-expression is most broadly conserved between the species are also those under the strongest purifying selection on their protein-coding sequences.
Elena M. van Zalen, Camilla Canovi, Vikash Kumar et al.· bioRxiv· 0 citations
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