In evolutionary algorithms powered by language models, the LLM acts as a single operator that simultaneously updates structural components (like control flow) and continuous parameters. While LLMs can be good at the first, they are not efficient at the second, wasting tokens taking discrete jumps inside a trial and error loop. We resolve this by formalizing a hybrid nested search, in which an outer loop has the LLM propose a structural sketch, with numeric gaps, and an inner numerical optimizer tunes the sketch. Both the outer and inner solvers are pluggable: any text-based optimizer can be combined with a zero-order optimizer (CMA-ES), gradient-based routines, or MCMC samplers. We validate our framework across three scientific domains: (i) meta-optimizers on closed-form test functions, (ii) code-based policies for systems research and social dilemmas; and (iii) approximate Bayesian inference tasks. Across all three, the hybrid optimizer is superior to both vanilla LLM-driven search and pure numerical optimization baselines. Code at: https://github.com/vicgalle/hybrid-nested-search
Benchmarks for systems that are optimized against the evaluation signal measure something different from what they claim. We document this concretely in two GPU-kernel-optimization suites with held-out generalization gates: Metal-Sci (10 scientific-compute tasks) and Metal-ZK (12 zero-knowledge/cryptographic tasks), in which three frontier LLMs (Opus 4.7, Gemini 3.1 Pro, GPT-5.5) propose Metal kernels inside a $(1{+}1)$ evolutionary loop with rich feedback. Although no model is prompted to act adversarially, the promoted winners repeatedly fingerprint the evaluation configuration: they branch on the identity of runtime parameters, tune the measured branch maximally, and leave the unmeasured branch slow or silently wrong. Across the pooled suites, $16/53$ ($30\%$) of in-distribution wins fail to transfer to held-out configurations. We give a four-mode taxonomy of these failures, from configuration fingerprints to gate leakage. We distill design guidance for measurement under strategic optimization: held-out probes retain validity only on non-enumerable axes; gates must measure held-out performance, not just correctness; and a transfer rate is interpretable only with per-failure mechanism grades: ours decomposes into gamed, overfit, and benign. Code and research artifacts: https://github.com/vicgalle/kernel-fingerprinting
