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Vít Škrhák

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#small language model Open access Oct 2026

Seq2Pocket: Augmenting protein language models for spatially consistent binding site prediction

Abstract Motivation Protein-ligand binding site prediction (LBS) is important for many areas of structural biology and molecular modeling, where, as in other tasks, protein language models (pLMs) have shown great promise. In their application to LBS, the pLM classifies each amino acid as binding or not, but translating...

Vít Škrhák, Lukáš Polák, Marián Novotný et al. · 0 citations

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