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Xuan Zhang

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Jul 2026

Sequence-based modeling of plant epigenomes reveals cell-type-specific cis-regulatory grammar

PEAgent provides a foundational resource for decoding cell-type-specific plant cis-regulatory logic and interpreting noncoding variation in plants, and distinguishes grass-conserved from lineage-specific regulatory sequences better than sequence conservation scores alone.

Jie Yao, Jiaqi Li, Xuan Zhang et al. · 0 citations
Open access Jul 2026

Easy-Multiome enables joint profiling of gene expression and chromatin accessibility in single cells

Easy-Multiome, a streamlined single-cell multiomic workflow that integrates a single in situ reverse transcription step into the standard droplet-based scATAC-seq protocol, is presented, demonstrating that robust and efficient joint profiling of plant gene expression and chromatin accessibility while requiring only min...

Xuan Zhang, Mark A. A. Minow, Robert J. Schmitz · 0 citations

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