Sep 2026
k-mer-based Upstream Preprocessing of long reads for Isoform Discovery.
KuPID preprocessing simultaneously increases the f1 accuracy of isoform discovery pipelines by up to 11.6 points while decreasing the runtime by a factor of 2-3×; and increases downstream accuracy by filtering out extraneous reads.
Molly Borowiak, Y. Yu
· Genome Research · 0 citations