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Author

Ze-Yuan Dong

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Jul 2026

DARMN: Domain-Aware Residual Feature Modulation Network for Multidomain Protein Dynamic Inter-Residue Contact Prediction.

The Domain-Aware Residual Feature Modulation Network (DARMN), a deep learning framework for dynamic inter-residue contact prediction in MDP outperforms existing dynamic contact prediction and conformational ensemble prediction models, especially in long-distance contact identification, and generalizes well to unseen MD...

Jing Xiao, Wei-Bu Wang, Yi-Bo Ma et al. · 0 citations
Aug 2026

SA-MPNN: A Sequence-Aware ThermoMPNN for Accurate Prediction of Mutational Effects on Protein Thermodynamic Stability.

Predicting the impact of single-point mutations on protein thermodynamic stability is crucial for protein engineering of therapeutic and industrial applications. By effectively capturing the three-dimensional structural information of proteins and the spatial physical environment of each residue, the inverse folding mo...

Xin-Yue Zhang, Xiang-Shan Zheng, Ze-Yuan Dong et al. · 0 citations

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