From Laboratory to Field: Unveiling Microbial Community Dynamics to Optimize a Bioaugmentation System with Engineered Redox Zones for Nitrogen Removal in Polluted Waters
Aug 2026· Microorganisms· Vol 14, pp. 1743· 0 citations· 52 references
Medicine
TL;DR
A pilot-scale, partitioned treatment system (aerobic bio-contact oxidation zone followed by a hybrid anoxic zone) was designed and implemented in a black-odorous river channel and demonstrated robust performance over 60 days, sustaining average removal rates of 93.2% for NH4+-N and 91.3% for TN.
Abstract
The remediation of nitrogen-polluted receiving waters remains a significant challenge, particularly due to the frequent disconnect between understanding the mechanistic action of microbial inoculants and designing effective, field-applicable treatment processes. This study aimed to bridge this gap by evaluating a commercial composite microbial inoculant and translating the insights into a practical in situ system. Laboratory-scale experiments identified an “aerobic-anoxic” operational mode as optimal, achieving an initial NH4+-N removal efficiency of 95.6% (reducing from 55.6 mg/L to <1.0 mg/L) within the first 7 days. Simultaneously, a distinct three-stage nitrogen transformation process was established, driving the terminal total nitrogen (TN) concentration down to a remarkable 2.6 mg/L, which corresponds to a superior cumulative TN removal efficiency of 95.90%. Concurrently, robust organic matter degradation and phosphorus clearance were achieved, yielding final laboratory removal efficiencies of 67.4% for COD and 6.4% for TP. High-throughput sequencing revealed that this performance was driven by significant microbial succession and environmental filtering, with functional genera such as Sediminibacterium (contributing to early-stage organic degradation and nitrogen transformation) and Kocuria (acting as metabolic drivers under transitioning redox conditions) becoming predominant during specific degradation phases. Based on these mechanistic findings, a pilot-scale, partitioned treatment system (aerobic bio-contact oxidation zone followed by a hybrid anoxic zone) was designed and implemented in a black-odorous river channel. The system demonstrated robust performance over 60 days, sustaining average removal rates of 93.2% for NH4+-N and 91.3% for TN. This work provides a validated framework that directly links the elucidation of microbial community dynamics under engineered conditions to the successful development of a manageable bioaugmentation strategy for treating nitrogen-contaminated receiving waters.
This study evaluates an air-lift multistage integrated reactor designed for township wastewater treatment. Under controlled aeration, the reactor established distinct dissolved oxygen zones (1.06, 1.46, and 1.89 mg/L from bottom to top) and maintained high mixed liquor suspended solids (MLSS), which together promoted both aerobic and anaerobic denitrification. During extended operation, the system achieved average removal efficiencies of 93.3% for chemical oxygen demand (COD), 96.2% for NH4+-N, 74.9% for total nitrogen (TN), and 92.9% for total phosphorus (TP). Concurrently, the evolution of extracellular polymeric substances (EPS) and enhanced sludge activity─as shown by increases in dehydrogenase activity (DHA) and specific oxygen uptake rate (SOUR)─contributed to the formation of microenvironments favorable for nutrient removal. High-throughput sequencing revealed a dynamic shift in microbial community composition, marked by enrichment of functional genera such as Pseudomonas, Flavobacterium, and Acinetobacter, and by a significant increase in the abundance of the napA gene linked to aerobic denitrification. The above results indicate that the air-lift multistage integrated reactor process has significant application potential in rural sewage treatment.
Fan Wang, Yuying Fan, Haigang Zhang et al.· ACS ES&T Water· 0 citations
Heterotrophic nitrification-aerobic denitrification (HN-AD) enables simultaneous nitrification and denitrification under aerobic conditions. However, the pathways and mechanisms by which microplastics (MPs) affect HN-AD mediated nitrogen transformation remain unclear, limiting the development of remediation strategies for co-polluted aquatic systems. To address this gap, microcosm tests integrated with optical characterization and high-throughput 16S rRNA sequencing were conducted to evaluate polyethylene microplastic (PE-MPs) influences. Results revealed a concentration-dependent dual effect where PE-MPs suppressed nitrite oxidation and denitrification, featuring a distinct inhibition threshold and inducing NO2--N accumulation up to 8.0 times the control level. Mechanistically, PE-MPs acted as physical carriers that promoted microbial colonization and biofilm development, thereby facilitating microbial community dispersion and boosting the transformation. Concurrently, leaching of chemicals from PE-MPs reduced microbial abundance and diversity, depressing nitrite oxidation. Notably, the relative abundance of HN-AD functional taxa increased with rising PE-MPs concentrations. Emergent dominant phyla, Myxococcota and Patescibacteria, were significantly enriched, indicating adaptive. These opposing forces define the critical concentration threshold where the promotion of ammonia oxidation shifts to inhibition and the overall denitrification collapses. Ultimately, the concentration-driven battle between physical and chemical disrupts the HN-AD microbial community, severely hindering nitrogen transformation. This study provides mechanistic insights into the complex interplay between MPs and nitrogen transformation, offering novel perspectives for optimizing bioremediation strategies in MPs and nitrogen co-polluted aquatic systems.
Xue Bai, Mengying Yi, Lang Ran et al.· Bioresource Technology· 0 citations
The operational stability of continuous-flow partial denitrification-anammox (PD/A) systems is frequently constrained by insufficient nitrite supply and temperature sensitivity of anammox bacteria, particularly under low-temperature stress. In such conditions, filamentous bacteria often proliferate excessively, and their overgrowth has long been associated with reactor instability and performance deterioration. Here, we demonstrate stable nitrogen removal in a filamentous-dominated continuous-flow PD/A reactor at an average temperature of 16.7 °C through operational optimizations and microbial responses. The reactor achieved 89.8 % total nitrogen removal, with ammonium and nitrate removal efficiencies of 97.2 % and 91.5 %, respectively, with anammox contributing up to 98.3 % of nitrogen removal. Metagenomic analyses revealed that the filamentous genus Sphaerotilus dominated the microbial community (29.3-41.5 %) but sustained the genomic potential for nitrite availability to support anammox. Genome-centric reconstruction confirmed that a Sphaerotilus-affiliated MAG5 possessed adaptive features under low temperature. Additional heterotrophs, including Leptothrix, Rubrivivax, and Thauera, harbored genomic potential for auxiliary nitrate-to-nitrite conversion. Crucially, the synergy between this genomic potential for nitrite provision and engineered biomass retention (specifically mesh filtration and regular sludge return) facilitated the enrichment of Ca. Brocadia, increasing its relative abundance from 2.4 % to 5.4 %. Concurrently, Ca. Brocadia reinforced low-temperature adaptability by expanding the genetic potential of energy-generating carbon metabolic pathways and increasing its contribution to the cold shock protein gene cspA from 6.6 % to 21.0 %. Collectively, this study reveals that integrating strategic biomass retention with microbial responses provides a viable pathway to sustain stable nitrogen removal in filamentous-dominated continuous-flow PD/A systems.
Jiarui Fan, Shenbin Cao, Rui Du et al.· Bioresource Technology· 0 citations