Substitutions affecting the HA–NA–receptor balance preceded the emergence of the pandemic 2009 H1N1 virus
Abstract
Significance Influenza A pandemics greatly affect the human population every few decades when a novel animal virus breaches the species barrier. The H1N1 pandemic of 2009 (H1N1pdm09) is the first pandemic in the genomics era, which allows us to identify and study in detail mutations in prepandemic swine viruses associated with the jump to humans. Here, we highlight adjustment of the balance between HA-mediated receptor binding and NA-mediated receptor cleavage (HA–NA balance) as a step that occurred in swine prior to the emergence of H1N1pdm09 virus in humans. These findings suggest that not only mutations in HA, but also in NA, may contribute to the pandemic potential of animal viruses.