eDNA Metabarcoding of COI and 12S Markers Reveals Biodiversity and Interactions Between Shallow and Upper-mesophotic Reefs at Burung Island, Karimunjawa National Park
Aug 2026· Thalassas: An International Journal of Marine Sciences· Vol 42· 0 citations· 79 references
TL;DR
The ecological importance of mesophotic reefs in supporting shallow reef communities is highlighted and the potential of integrating eDNA with conventional surveys to strengthen biodiversity monitoring and management in Indonesian MPAs is emphasized.
Environmental DNA (eDNA) metabarcoding is an efficient, non-invasive approach for surveying fish diversity in complex habitats such as large rivers. This study conducted continuous eDNA monitoring along the Jiangsu section of the Yangtze River mainstem from 2022 to 2024 to characterize spatiotemporal variations in fish...
Yin-Huan Wang, Denghua Yin, Si-Lei Liu et al.· Diversity· 0 citations
Results indicate that depth is the primary factor influencing zooplankton community organisation in the CIOB, and establishes a pre-disturbance reference for monitoring mesozooplankton diversity in potential regions targeted for deep-sea mineral exploration and future mining.
This study investigates concordance between eDNA metabarcoding species detection and traditional bottom trawl survey catch across 24 temperate and tropical marine sites spanning five ocean regions within the context of marine biology and environmental genomics, an area of growing scientific importance given its implica...
Sian M. Roberts, Kofi T. Mensah-Baffour, Aiko Y. Nakamura· Princeton Journal of Pre-Col...· 0 citations
The present study employed environmental DNA (eDNA) metabarcoding of the metazoan community composition and diversity in relation to water quality parameters from four major river estuaries of South Sumatra, Indonesia (Sembilang, Banyuasin, Musi, and Air Salek). Surface water samples (1 L each) were collected in tripli...
Melki Melki, A. Purwiyanto, W. Putri et al.· Aquatic Sciences· 0 citations
Invertebrates are key components of coastal ecosystems, yet their diversity and distribution in the Baltic Sea often remain poorly resolved due to methodological constraints. This study employed environmental DNA (eDNA) metabarcoding of the 18S rRNA gene to characterise invertebrate assemblages from nine water samples...
F. Lüskow, L. Nordlund· Marine Biodiversity· 0 citations
Freshwater biodiversity is declining at alarming rates globally, yet our capacity to monitor it depends heavily on the methods used for biodiversity assessment. Stream benthic macroinvertebrates are widely used as bioindicators, but traditional morphological identification is labor-intensive and limited by taxonomic ex...
Daniel C. Allen, Z. Compson, Chelsea R. Smith et al.· bioRxiv· 0 citations
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