Nucleotide diversity and evolutionary rate analyses across mitogenomes of Oedipodinae revealed pervasive purifying selection acting on all 13 PCGs, which strongly supported M. wagneri as a monophyletic lineage within the subfamily Oedipodinae.
Abstract
We employed second-generation sequencing technology to determine the complete mitochondrial genome of Mioscirtus w. wagneri (Eversmann, 1859), which is the first species reported in the genus Mioscirtus. The mitochondrial genome spans 15,632 base pairs and encodes 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and an AT-rich control region (D-loop region). The nucleotide composition exhibits a strongly A+T bias (75.6%). Among the 13 PCGs, 27 codons exhibited higher usage frequencies, predominantly with A/U endings. All tRNA genes adopt the canonical cloverleaf secondary structure, except for tRNASer(AGN), which lacks the dihydrouridine (DHU) arm. Nucleotide diversity and evolutionary rate analyses across mitogenomes of Oedipodinae revealed pervasive purifying selection acting on all 13 PCGs (Ka/Ks < 1). Among these, ND2 exhibited the highest nucleotide diversity, whereas ND4L exhibited the lowest. Phylogenetic analyses were conducted based on the concatenated nucleotide sequences of all 13 PCGs, using both Maximum likelihood (ML) and Bayesian inference (BI) frameworks, which produced an identical topology strongly supported M. w. wagneri as a monophyletic lineage within the subfamily Oedipodinae. This lineage formed a sister group relationship with species of the genus Celes and shared a most recent common ancestor with species of the genus Oedipoda, together constituting the tribe Oedipodini. This phylogenetic relationship is consistent with traditional morphology-based classifications. These findings expand the currently sparse mitogenomic resource for the subfamily Oedipodinae and provide a robust genetic foundation for future studies on the population genetics and evolutionary history of M. w. wagneri.
The first complete mitochondrial genome of L. tchangi is reported, which strongly support the monophyly of the subfamilies Leptobotiinae and Botiinae, as well as the monophyly of each genus within the family Botiidae; and clarifies the taxonomic status of L. tchangi within Botiidae.
Overall, this study uncovers inversion-driven mitochondrial gene rearrangements as a major evolutionary force in Littorinimorpha, expanding genomic resources for Naticidae and refining phylogenetic relationships within this diverse clade.
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Abstract The complete mitochondrial genome of Plagiognathops microlepis was sequenced using Illumina NovaSeq and PacBio Sequel II platforms. The circular mitogenome is 16,632 bp in length and contains 37 genes: 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes and a non-coding c...
Huiming Zhou, Guo-Yong Xiong, Jiaxin Yuan et al.· Mitochondrial DNA. Part A, D...· 0 citations
The family Uzelothripidae is represented by a single genus Uzelothrips and can be distinguished from others by the presence of whip-like antennae, a circular ventral sensorium on antennal segment III, a well-developed tentorium, and a membranous ovipositor. Here, we generated the first complete mitochondrial genome of...
The mitogenome of the decorator crab Hyastens ducator is sequenced for the first time, clarifies its phylogenetic position, enriches the molecular dataset for the family Epialtidae and provides an important reference for future taxonomic and evolutionary studies of Majoidea.
Chenfang Niu, Ji-Chun Li, Ying-Xuan Bao et al.· Crustaceana· 0 citations
The first complete mitogenome of Eurostus validus is reported and indicates that both mutation pressure and natural selection shape codon usage bias, with natural selection playing a dominant role.
Dong-Kai Liu, Chao Xue, Yingyin Gao· Journal of the Entomological...· 0 citations
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