Aug 2026· Scientific Data· Vol 13· 0 citations· 40 references
Medicine
TL;DR
An open-source, browser-based annotation tool integrating the Segment Anything Model (SAM2) and CUTIE for efficient semi-automatic segmentation and tracking and facilitates high-quality annotations without specialized hardware, improving accessibility and reproducibility within the marine imaging community.
Abstract
The automatic monitoring of fish in underwater imagery plays a key role in marine ecology, fisheries management, and environmental monitoring, yet progress is limited by the lack of large, high-quality fish-focused datasets. We present a new dataset of underwater videos of fish in natural habitats, annotated for pixel-level segmentation and multi-object tracking. The data was collected in the Balearic Sea, the western Mediterranean region surrounding the island of Mallorca (Spain), across diverse marine environments to capture variations in species, lighting, turbidity, and background complexity. Each video frame has been carefully annotated to ensure spatial and temporal consistency, yielding a challenging and comprehensive resource for developing and benchmarking underwater vision algorithms. To illustrate the dataset’s utility, we provide baseline tracking results obtained with Deep OC-SORT, which highlight both the dataset’s challenging nature and its potential for future method evaluation. In addition, we release an open-source, browser-based annotation tool integrating the Segment Anything Model (SAM2) and CUTIE for efficient semi-automatic segmentation and tracking. This tool facilitates high-quality annotations without specialized hardware, improving accessibility and reproducibility within the marine imaging community.
This review provides a comprehensive analysis of cutting-edge deep learning architectures designed for underwater object detection, segmentation, and tracking, and explores alternative modalities such as sonar, hyperspectral imaging, and event-based vision, which provide complementary data to enhance underwater vision...
CH Vasundara, G. M. Krishna· International Scientific Jou...· 0 citations
Underwater filter-nets play a critical role in aquaculture and marine engineering, where reliable condition monitoring is essential for ensuring operational safety. Although video-based filter-net segmentation enables automated inspection and early fault detection, its performance is significantly hindered by underwate...
Jiawei Wang, Hongwen Yu, Zini Wang et al.· International Conference on...· 0 citations
The results suggest that the YOLOv8 object detection model is most effective for abundant and visually distinctive taxa, while performance declines for groups with coarse taxonomic resolution.
Talen Rimmer, Colin Bates, Declan McIntosh et al.· Italian National Conference...· 0 citations
WIO-ReefFish, a reef fish detection dataset derived from diver-operated line-intercept transects and designed for ecological monitoring under natural survey conditions, is presented and established as a realistic benchmark for automated reef fish detection and a foundation for more robust computer-vision tools in coral...
J. Gerard, Luca Branger, F. Huyghe et al.· bioRxiv· 0 citations
A novel deep learning framework designed to enhance the accuracy and robustness of fish counting, termed OGLA-Net is proposed and systematically evaluated across three datasets, demonstrating that the proposed counting framework delivers high accuracy across diverse conditions, providing a reliable solution for automat...
Tong-Tong Gu, Zheng-Meng Wu, Da-She Li et al.· Journal of King Saud Univers...· 0 citations
A computer vision pipeline that integrates monocular depth estimation using MiDaS with YOLOv11 object detection with the aim of delivering accurate and reliable weight estimation without the need for using stereo-cameras is presented, making it very well-suited for practical deployment in real-world aquaculture environ...
Said Al-Abri, S. Keshvari, Rami Al-Hmouz et al.· IEEE Access· 0 citations
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