Jul 2026· Journal of Fungi· Vol 12, pp. 557· 0 citations· 42 references
Medicine
Abstract
Temperature constrains stable mycelial growth and production of Oudemansiella raphanipes, but its molecular response to heat stress followed by recovery remains insufficiently resolved. We integrated untargeted LC-MS metabolomics and RNA sequencing to compare control mycelia maintained at 28 °C (HPJZ28) with mycelia exposed to 42 °C for 6 h and then allowed to recover at 28 °C for 2 h (HPJZ42-R). Metabolomic and transcriptomic profiles separated clearly between the two conditions, indicating broad post-heat recovery-associated molecular remodeling. Most differential metabolites were lower in HPJZ42-R, whereas a smaller subset accumulated, suggesting selective metabolic reorganization rather than generalized activation. Transcriptome analysis identified extensive gene-expression remodeling, with 1081 upregulated and 1878 downregulated genes in the HPJZ28 versus HPJZ42-R comparison. Pathway-level analyses implicated central carbon metabolism, lipid metabolism, amino acid metabolism, peroxisome-related processes, and calcium signaling. Because the sampling design included a recovery period and a single post-stress time point, integrated gene–metabolite correlations are interpreted as exploratory associations rather than evidence of direct regulatory coupling. These results provide species-level multi-omics evidence for the post-heat recovery state of O. raphanipes and identify candidate pathways for future functional and physiological validation.
Under severe stress, GO and KEGG enrichment consistently revealed the reinforcement of central carbon and energy metabolism, peroxisome-associated fatty acid turnover, oxidoreductase/redox activities, and translation and nucleotide metabolic pathways.
Dingkang Wang, Li Wang, Yue Xiao et al.· Journal of Proteome Research· 0 citations
Simple Summary Low temperatures can strongly affect insect development, survival and physiological performance, particularly in species adapted to warm environments. Here, we characterized the responses of Tuta absoluta larvae after continuous exposure to three thermal regimes—25, 15 and 5 °C—for 7 days using integrated physiological, metabolomic and transcriptomic analyses. Our study shows that cold exposure disrupts feeding, digestive enzyme activity, energy storage and redox balance in T. absoluta larvae. Larvae exposed to lower temperatures showed reduced survival and growth performance, together with depleted glycogen reserves and weakened antioxidant defenses. Meanwhile, protective compounds such as trehalose and proline accumulated, suggesting a shift from normal growth metabolism toward stress protection. Molecular analyses further revealed changes in pathways associated with carbohydrate and amino acid metabolism, energy production, oxidative stress, and development. Overall, the findings indicate that cold stress forces T. absoluta larvae to reallocate resources from growth and feeding toward survival. This work provides useful insight into the physiological and molecular basis of low-temperature sensitivity in an important agricultural pest.
Bo Feng, Chuanhong Feng, Zhihao Ling et al.· Biology· 0 citations
Metabolic resistance is commonly attributed to the overexpression of detoxification enzymes, whereas the metabolic systems that sustain detoxification remain less well resolved. Here, we integrated widely targeted metabolomics and transcriptomics to compare the clothianidin-resistant brown planthopper strain CLR with the susceptible strain CLS and validated candidate genes in an independent nitenpyram-resistant background. CLR and CLS exhibited distinct metabolomic profiles. Differential genes and metabolites converged on carbon metabolism, glycolysis/gluconeogenesis, the tricarboxylic acid cycle, glutathione metabolism, pentose and glucuronate interconversions, cytochrome P450-mediated xenobiotic metabolism, and ABC transporters. These changes were summarized into four interconnected modules involving glycolytic energy supply, protective sugar-derived metabolites, pyruvate–TCA–malate metabolism, and UGT-mediated glycosylation. Expression analysis identified a mitochondrial NADP-dependent isocitrate dehydrogenase gene and UDP-glucosyltransferase 2 (UGT2) as consistently upregulated in both resistant backgrounds. Silencing NADP reduced the LC50 of nitenpyram and clothianidin by 1.84- and approximately 1.81-fold, respectively, whereas UGT2 silencing produced corresponding reductions of 1.89- and 1.83-fold. These findings indicate that neonicotinoid resistance in Nilaparvata lugens is supported by coordinated remodelling of central metabolism and detoxification and identify two candidate metabolic nodes for further resistance management research.
The proteomic basis of thermal adaptation in P. plecoglossicida is revealed and molecular targets for engineering thermotolerant strains to optimize industrial 2-KGA fermentation are provided.
Daming Wang, Yu-Ming Jing, Qing-hong Wang et al.· 3 Biotech· 0 citations
This study provides a root-focused transcriptomic resource and identifies candidate regulatory genes potentially linking ABA-related responses with lignin/lignan-associated metabolism in H. pedunculosum under salt stress.
Yang Tao, Xiao Huang, Enhao Zhang et al.· Plant physiology and biochem...· 1 citation
Diapause in Coridius chinensis is a complex survival strategy that enables them to survive under prolonged cold stress. To elucidate the mechanisms of temperature regulation during diapause, we conducted multi-omics analyses, including gut metagenomics, brain transcriptomics, and fat body metabolomics, under both normal (25 °C) and diapause conditions (4 °C). Gut microbiome analysis revealed an extreme polarization during diapause, dominated by the endosymbionts Pantoea endophytica (52%) and Rickettsia bellii (47.4%), while functional microbiota such as Pantoea and Dietzia were significantly reduced. This shift suggests a trade-off where microbial metabolic diversity is sacrificed in favor of intracellular symbionts that may regulate host mitochondrial activity and suppress energy consumption. Brain transcriptomic analysis indicated a downregulation of neural signaling pathways related to feeding suppression, stress resistance, and circadian rhythm regulation. Fat body metabolomics identified the coordinated activation of 13 core pathways that link energy storage with stress adaptation, with dynamic changes ranging from rapid stress responses (0–300 AU) to energy storage dominance (300–500 AU), and finally to a state of homeostasis (>500 AU). Notably, dysregulated choline metabolism was significantly correlated with necrotic features (r = 0.78, p < 0.001), while catecholamine biosynthesis derived from tyrosine emerged as a corrective pathway, revealing the mechanistic link between metabolic flexibility and survival. Adults primarily utilize plants within the Cucurbitaceae, Fabaceae, and Solanaceae families as hosts, underpinned by long-standing folk traditions in specific localities regarding their dietary consumption or therapeutic application.
Yantao Pang, Yajuan Chen, Qi Huang et al.· Frontiers in Microbiology· 0 citations