Skip to content

Monte Carlo-based SMILES-driven QSPR modeling of Organic Chromophores across the visible-to- NIR spectral range.

Aug 2026 · Journal of Molecular Graphics and Modelling · Vol 148, pp. 109533 · 0 citations · 57 references
Medicine

Abstract

Developing organic chromophores with tailored optical properties is a key objective in material chemistry. In the present study, a dataset of 130 organic chromophores was used to build QSPR models for absorption and emission maxima using CORAL. The models were generated using SMILES derived descriptors optimised through Monte-Carlo method. The model stability was evaluated using non-identical data splits and multiple target functions IIC, CII, CCCP and correlation balance. The resulting models showed good predictive performance based on internal and external validation parameters such as R2, Q2, MAE and standard error. Among the developed models, A18 generated using the CCCP-based target function (TF-4) is the best model for absorption maxima with validation statistics of R2 = 0.8404, Q2 = 0.8261, MAE = 39.4, AvRm2 = 0.7703 and ΔRm2 = 0.1077. For emission maxima, F10 provided the best overall performance, giving R2 = 0.8332, Q = 0.8192, MAE = 32.4, AvRm2 = 0.7615 and ΔRm2 = 0.0019. These results confirm the predictive reliability of the SMILES-based CORAL models. Applicability domain assessment indicated that most of the compounds were within the reliable prediction range of the models. These results suggest that the proposed models can be used as a practical tool for estimating chromophores spectral properties and guiding the design of near-infrared materials.

View source

Similar papers

Open access Aug 2026

Prediction of the Molecular Lipophilicity of an Alkylphenol Family Using Quantum Chemistry and QSPR Methods

This study examined the relationship between the water/octanol partition coefficient of eighteen alkylphenols and molecular descriptors derived from quantum-chemical calculations using a quantitative structure-property relationship (QSPR) approach. The experimental database was divided into a training set of fourteen c...

Fatogoma Diarrassouba, K. Bamba, N. Ziao · 0 citations
Open access Sep 2026

A set of optimized 3D-MoRSE descriptors for molecular representation

An optimized 3D-MoRSE (OPT3D) molecular representation is developed and evaluated that introduces a tunable distance-scale factor to better capture informative interatomic distance regimes and exhibits strong robustness under moderate noise.

Xiao-Peng Li, Zhou-Fa Hu, Ning-Yi Cui et al. · 0 citations
Open access Sep 2026

Machine learning–driven design of π-conjugated systems in isomer space with target absorption spectra: a case study of Effenberger dye

This work presents a proof-of-concept study exploring the isomer space of the Effenberger dye to evaluate approaches for predicting optical properties aimed at the design of new compounds. A diverse library of isomers was generated, differing from the reference dye, and quantum chemical parameters were calculated using...

M. Kyrpa, I. Khristenko, V. Ivanov · 0 citations
Sep 2026

Atom-based 3D-QSAR, pharmacophore modelling and molecular dynamics guided identification of thienopyrimidinone derivatives targeting EGFR in breast cancer.

Breast cancer still ranks to be one of the primary causes of cancer-related death worldwide, underscoring the critical need for innovative targeted treatment agents with enhanced safety and efficacy. The current work examined Thienopyrimidinone-based derivatives as possible EGFR inhibitors for breast cancer treatment u...

Shashikant V. Bhandari, Rutuja R. Napte, S. Patil et al. · 0 citations
Open access Sep 2026

Design of New Alkylphenols with Theoretical Values of their Water/ Octanol Partition Coefficients

In our previous work, we established a predictive QSPR (Quantitative Structure-Property Relationship) model for the water/octanol partition coefficient, based on electronic energy (ET), LUMO (Lowest Unoccupied Molecular Orbital) energy, and the energy gap (ΔEgap). This model has been shown to be suitable for predicting...

Fatogoma Diarrassouba, Cheickna Cisse, K. Bamba et al. · 0 citations

We use cookies to run the site and, with your consent, for analytics and to show ads. See our Cookie Policy.