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Pranam Chatterjee

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Preprint Jul 2026

Rethinking Benchmarks and Models for Enzyme Specificity Prediction

Four recently released ES and ER prediction models are benchmarked and it is suggested that interaction-aware representations from full biomolecular complexes may provide a promising basis for enzyme prioritization.

Elizabeth H. Mahood, N. Komorníková, Tom'avs Pluskal et al. · 0 citations
#protein folding Open access Aug 2026

Adaptive model-guided protein evolution with sparse data optimizes compact eukaryotic genome editors.

EvoMax is established as an integrated strategy for engineering compact eukaryotic Fz2 genome editors and FanzMAX v3-hLa is identified as a high-efficiency programmable nuclease for mammalian genome editing.

Shijie Wan, Jackson Gold, Pranay Vure et al. · 0 citations
Open access Jul 2026

PeptiVerse: A unified platform for therapeutic peptide property prediction

PeptiVerse is a unified platform that leverages large foundation models to predict diverse peptide developability properties from both amino acid sequences and SMILES representations, enabling accessible, scalable analysis for peptide drug design.

Yinuo Zhang, Sophia Tang, Tong Chen et al. · 5 citations · ⚡1