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R. F. de Souza

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#protein folding Open access Aug 2026

A structure-guided classification framework reveals the diversity and catalytic architecture of BECR ribonuclease

The analysis resolves an expanded BECR-fold landscape comprising canonical BECR and BECR-like superfamilies, refines the organization of canonical BECR proteins and identifies previously unrecognized families, and expands and clarify the BECR-fold landscape.

Kristi Pham, Gianlucca G. Nicastro, Audrey R. Long et al. · 0 citations
Open access Aug 2026

ppigFinder: an integrated desktop application for bacterial genome annotation and AlphaFold 3-based protein–protein interaction screening

ppigFinder combines ORF prediction, functional annotation, genomic-neighbourhood inspection, AlphaFold 3 job generation, remote job submission, and structural-confidence analysis within a single environment for genome-based PPI discovery from nucleotide sequence data.

G. U. Oka, Camilla Adan, Celso Vítor Alves Queiroz Calomeno et al. · 0 citations

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