Supplementary Tables S1-S16 from Spatial Mapping of the Precancer-to-Cancer Transition in Breast and Prostate
Supplementary Table 1. Clinical metadata Supplementary Table 2. 3D stacked serial sections overview Supplementary Table 3. 2D gene discovery sections overview Supplementary Table 4.CODEX panel information Supplementary Table 5. Xenium panel information Supplementary Table 6. HT704B1 distant region path metadata Supplementary Table 7: Section retention for 3D cohort Supplementary Table 8. Model architecture, hyperparameters, and training details for H&E protein prediction Supplementary Table 9. 3D serial section ROI summary metadata Supplementary Table 10. 3D serial section ROI path metadata Supplementary Table 11. 2D marker gene discovery: section-level feature metrics Supplementary Table 12. 2D marker gene discovery: visium barcode annotations Supplementary Table 13. 3D ROI manual marker gene discovery: feature expression for annotated regions Supplementary Table 14. 3D ROI manual marker gene discovery: feature fold change for annotated regions Supplementary Table 15: Data associated with breast functional assays Supplementary Table 16: Data associated with prostate functional assays.