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Author

Shikhi Baruri

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#gene editing Open access Aug 2026

Comparative Analysis of Lifecycle-Dependent A to I RNA Editing in Three Members of the Microbotryum violaceum Fungal Complex

Gene expression analysis revealed that certain genes, uniquely edited during the mating stage of MvSup, tend to be upregulated in the haploid stage but downregulated during mating, and vice versa, while the a2 haploid strain of MI had fewer editing sites compared to other haploid strains.

Shikhi Baruri, Nasara Shamsudeen, Alycia C. R. Lackey et al. · 0 citations
Review Open access Jul 2026

SNP Detection Strategies in Genomic Research: A Comparative Review of Major Tools, Algorithms, Challenges and Applications

This review compares SNP detection programs such as GATK, BCFtools, FreeBayes, SAMtools, SAMtools, and DeepVariant and their algorithmic structures, namely pileup- based, haplotype-based, and machine-learning approaches and suggests that no single tool is the best.

Shikhi Baruri, Sunita Khanal · 0 citations