Preprint
Aug 2026
A framework for combined epidemiological-genomic inference to improve estimation of household model parameters
A continuous-time Markov chain formulation for household transmission dynamics in which the model state space is expanded to include transmission graphs describing infection direction and order, with idealised pathogen genomic data used to identify the transmission histories compatible with observations is developed.
Golsa Sayyar, J. Hilton, T. House
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