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Yuguo Zheng

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Sep 2026

Structure-guided evolution of Marinobacter subterrani deacetylase for enhanced herbicide precursor synthesis by substrate-binding pocket and channels engineering.

Deacetylases can directly hydrolyze amide bonds for the environmentally friendly synthesis of the herbicide intermediate O-(3-chloro-2-propenyl)hydroxylamine. However, the rigid halogenated chain of N-[(E)-3-chloroprop-2-enoxy]acetamide (NECA) may hinder productive substrate positioning and limit catalytic efficiency....

Yin-Feng Huang, Dian-Ju Wei, Hua-Chuan Wen et al. · 0 citations
Open access Oct 2026

Engineering the α-Helix Dynamics of Hydroxysteroid Dehydrogenase by Computational Design to Balance Catalytic Activity and Stability.

The stability-activity trade-off remains a major bottleneck in engineering robust biocatalysts for industrial applications. Here, we developed an integrated computational strategy to simultaneously enhance the catalytic activity and thermostability of 7α-hydroxysteroid dehydrogenase (7α-HSDH) by engineering highly flex...

Shu-Fang Li, Ting Zou, Sen-Yu Fu et al. · 0 citations
Oct 2026

SeqSol-FECS: An Integrated Deep Learning and Structural Modeling Framework for Protein Solubility Engineering

Escherichia coli is widely used as a workhorse for heterologous protein expression. However, insoluble protein expression is frequently encountered. The mechanisms underlying protein solubility remain incompletely understood, limiting the effectiveness of current protein solubility engineering strategies. Here, SeqSo...

Qian Guo, Xiao-Ting Zhou, Ren Zhou et al. · 0 citations
Aug 2026

Boosting Cytochrome P450 Electro-Catalysis: Substrate-Dependent Kinetics, Electro-Induced Activation, and NADH/NAD+ Ratio Control.

Efficient electron supply and cofactor utilization remain key bottlenecks in cytochrome P450-catalyzed oxidations. Here, we report an electro-assisted system that overcomes these limitations, using the P450 Ema1-catalyzed oxidation of avermectin B1a as a model reaction. Under a constant current of 1 mA, > 96% conversio...

Yu-Ke Cen, Yue Jiang, Jia-Jia Mou et al. · 0 citations
Aug 2026

Fine-Tuning l -Arginine Biosynthesis and Bidirectional Dynamic Control Overcome Metabolic Bottlenecks for High-Titer l -Ornithine Production in Escherichia coli

l-Ornithine is a versatile amino acid with broad applications in the pharmaceutical, nutraceutical, and food industries. However, its efficient microbial production is constrained by a critical trade-off: excessive blockage of the downstream l-arginine pathway severely impairs cell growth, while intracellular l-ornit...

Yingying Guo, Jia-Zhan Wang, Zhi Zhang et al. · 0 citations
Sep 2026

Key enzyme optimization and multi-node metabolic flux regulation drive l-arginine production in Escherichia coli.

Microbial production of l-arginine is often constrained by tight metabolic regulation and insufficient precursor supply. Here a plasmid-free, non-auxotrophic Escherichia coli strain for high-level production of l-arginine was rationally engineered, based on our previous constructed strain G0 with 12.4 g/L l-arginine pr...

Xin Gao, An-Yi Wu, Zi-Teng Yang et al. · 0 citations
#protein folding Oct 2026

Designing a DeepPCD Strategy for Efficient Engineering Nitrilases toward Industrial Bioconversion

The integration of artificial intelligence with protein engineering has created unprecedented opportunities for enzyme discovery and the enhancement of overall catalytic performance. In this study, a novel nitrilase, BhNIT, was identified from Bradyrhizobiumhuanghuaihaiense through a computationally assisted screenin...

Xiao-Ting Zhou, Qian Guo, Yao-Fang Ding et al. · 0 citations
Review Sep 2026

[Machine learning-based optimization strategies for fermentation processes].

This paper systematically reviewed the latest research progress on the closed-loop intelligent fermentation control systems, spanning from underlying data perception to high-level decision-making and the transformation of fermentation control from traditional "macroscopic feeding regulation" to "microscopic metabolic p...

F. Lu, Hua-Yao Chen, Hai-Yan Zhou et al. · 0 citations
Sep 2026

Enhanced d -Pantothenic Acid Biosynthesis in Corynebacterium glutamicum by the CPSPC System and Spatial Organization Strategy

d-Pantothenic acid (D-PA) is an essential precursor of coenzyme A and the acyl carrier protein. Its biosynthesis requires abundant precursors and precise regulation of the multifunctional enzyme, ketopantoate reductase. Here, we engineered Corynebacterium glutamicum for enhanced D-PA production through metabolic engi...

Qing Yang, Bo Zhang, Liang-Gang Huang et al. · 0 citations
Sep 2026

Combinatorial Metabolic and Process Engineering for Enhanced GA4+7 Production and Tunable GA4/GA7 Ratio in Fusarium fujikuroi.

This study demonstrated that the GA4/GA7 ratio can be modulated through both molecular and fermentation strategies, and engineering a high-yielding GA4+7 producer using this Δp450-3 mutant as a platform.

Jing-Wen Jia, Zheng-Bin Zhang, Ming-Han Li et al. · 0 citations

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