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artificial intelligence

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#artificial intelligence Preprint Open access Sep 2026

When Do Internal Probes Beat Reading the Answer? Miscalibrated Readouts and Behavior-Concealed Knowledge in Language Models

A 0.6B language model, asked to verify 1,200 logical conclusions (half valid, half corrupted by a single semantic edit), answers YES every time. Judged by behavior it discriminates nothing; linear probes on its hidden states read the correct verdict at 0.96 AUC, transferring to unseen logical structures and separating foils built from exactly the words of the true conclusion (0.90). We ask where the verdict is lost, and find the dominant failure is a single scalar. The verdict survives to the model's own output logits (margin AUC 0.89) along a well-aligned readout direction; a saturated decision threshold, offset by +4.6 sigma, erases it. The diagnosis generalizes: across 90 semantic-label configurations of a five-model, three-family factorial, behavioral accuracy collapses onto a single function of threshold offset (Spearman -0.93) while margin ranking moves far less. Across a 13x scale range, internal knowledge saturates while free-form behavior is non-monotone: an 8B model underperforms its 4B sibling through an answer-channel failure rather than the threshold; forced-choice accuracy is monotone. The diagnosis is actionable: a one-parameter correction, never fit on evaluated structures, repairs behavior from 50% to 81% (0.6B); calibrated margin decoding recovers 94% at 8B; few-shot prompting works the same way, recentering the threshold (+4.6 sigma to 0.0 sigma) while preserving ranking. Comparing probe to margin separates three regimes: concealed, miscalibrated, and undetected. On a maze task built so foils carry no surface cues, the audit correctly reports the third. In the standard generation setting, answer-surface features and heuristic labels reproduce published probing results without any internal access.

Gnaneswar Villuri, Hashmath Shaik, Alex Doboli · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Training-Free Halving of Activated Experts in Fine-Grained Mixture-of-Experts Models

Modern fine-grained Mixture-of-Experts (MoE) models route each token to a small number of experts and renormalize their router probabilities. We show that this renormalization implicitly calibrates expert output gain to the training top-$k$: reducing $k$ at inference changes not only which experts are used but also the strength of the expert branch. We separate these effects by activating the top $k_1$ experts while normalizing by the probability mass of the top $k_2$ experts, introducing one integer with no parameters, training, or measurable compute overhead. On Qwen3.6-35B-A3B, reducing from 8 to 4 experts causes a 4.65-point MMLU drop under standard renormalization but only 0.35 points with $k_2=16$, while halving routed-expert compute. The result replicates on the $11\times$ larger Qwen3.5-397B-A17B, where reducing from 10 to 5 experts loses only 0.55 points with an appropriate reference set. Removing renormalization entirely is catastrophic, showing that preserving a suitable reference mass is crucial. We further find that perplexity and downstream accuracy favor different $k_2$, cautioning against selecting MoE compression settings using unlabeled text alone. Analyses also show that expert identity matters substantially more than expert weighting, while balanced and domain-specialized routing leaves limited room for expert pruning.

Xing Chen, Hengshuai Yao · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Dynamic Adaptation of the LLM Context for Generating Routines with Coupled Semantics

LLM-based code generation fails when correctness depends on execution-dependent coupling: the meaning of one routine is defined by the runtime behavior of another, a relationship that cannot be resolved from textual descriptions alone. This limitation, which we call static binding, is not confined to explicitly coupled problems; it appears to varying degrees whenever correctness depends on joint execution behavior across components, from explicit cross-coupled optimizers to subtler joint constraints in packing, routing, and symbolic search. This paper proposes dynamic context adaptation, a sample-efficient validation-generation loop designed for this setting. A validation agent extracts structured diagnostic information from execution traces, providing gradient-like guidance to a generation agent that proposes multiple candidates per iteration. A knowledge graph derived from the problem description supplies semantic constraints to the generation agent. Simulated annealing selects among candidates to avoid greedy collapse. Our method outperforms zero-shot, Reflexion, and OpenEvolve on seven of eight problems at both 300 and 600 evaluations (p < 0.01), a regime where population-based search has not yet accumulated sufficient diversity to compete. Notably, on the primary motivating problem (cross-coupled optimization), our method also achieves the best score at 1000 evaluations, consistent with the hypothesis that structured execution feedback is most beneficial when correctness depends on runtime coupling. Ablation results confirm that structured execution feedback is the primary driver.

Gnaneswar Villuri, Hashmath Shaik, Alex Doboli · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Continual Field-Adaptive Models (CFAMs) for Post-Deployment Physical AI

Unattended interactive autonomy - machines that step into danger in place of humans and complete tasks with human tools - remains a missing capability in mission-critical operations. These domains offer scarce training data and only onboard compute, yet deployed systems must face novelty without erasing prior competence. We introduce Continual Field-Adaptive Models (CFAMs), which learn efficiently in the lab and continue learning after deployment through autonomous, gradient-free, on-device updates. CFAM uses a complementary learning architecture with a frozen slow-learning component and a fast-learning Capsule Field. The slow component contains three cortices: Sensor, which maps multimodal input into 3D-grounded geometry; Reasoning, which decomposes tasks into skills and evaluates outcomes; and Action, which executes geometric skills. The Capsule Field stores field learning one-shot and gradient-free as Competence Capsules. Skill installation is few-shot in the lab and continual in the field; open-world novelty is outside scope. We evaluate CFAM across five embodiments: manipulator, quadruped, humanoid, quadrotor, and off-road vehicle. Baselines (pi0, CogACT, SpatialVLA) use the same in-house multi-embodiment dataset for physical-platform comparisons. CFAM reaches the operating point of a standard policy trained on the full prior-training dataset using 40% of the data, or 2.5x fewer trajectories. At test time, autonomous capture of verified near-OOD cases improves action success by 13.9 percentage points. In sequential simulation, backward transfer is -0.5 percentage points versus -11.4 for LoRA. CFAM therefore provides a bounded form of post-deployment physical intelligence: few-shot skill learning, autonomous field growth from verified near-OOD experience, and retention of prior competence.

Amarjot Singh, Tanmay R. Pancholi, Jainam Kothari et al. · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Repeat-After-Me: Black-Box Adaptive Visual Prompt Injection

Prompt injection is widely recognized as a major security threat to AI agents that interact with untrusted external data, such as websites, documents, and emails. Prior work has shown that, in the text domain, black-box prompt injection can achieve near-perfect attack success rates (ASRs). In the image domain, however, existing visual prompt injection methods are substantially less effective in attacking frontier commercial VLMs for materially harmful behavior. Achieving such outputs is hard because it requires a long and/or format-compliant target string, such as a precise, parseable native tool call with exact function names and arguments. We present Repeat-After-Me, a black-box adaptive visual prompt injection attack that can reveal personally identifiable information or make malicious tool calls. Across both open-weight and commercial frontier VLMs, including Qwen3.6-27B and GPT-5.5, our method achieves ASRs exceeding 80% and 47%, respectively, under a realistic setting in which the benign user prompt is semantically unrelated to the injected task and does not verbally authorize it. In our evaluation, injections optimized on one surrogate retain 43-46% of the original ASR on two commercial victims, and cross-sample transferability retains 64-66% of the original ASR on those two models. We test our attack in a real-world OpenClaw agent: in a default OpenClaw Discord deployment, an untrusted user can use a minimally injected image to overwrite TOOLS.md, enabling future sensitive behaviors like remote code execution and secret exfiltration. We show our new attack vector works in cases where adaptive textual prompt injection fails. We discuss potential defenses.

Sizhe Chen, Yu-Lin Tsai, Ivan Evtimov et al. · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Pitch-class Steering for Diffusion-based Music Generation via Latent-space Probes

Recent work on controllable music generation has focused on autoregressive models, leaving diffusion-based systems comparatively underexplored. We present a lightweight method for steering the pitch content of audio produced by Stable Audio Open, a latent diffusion model for music synthesis. A small convolutional probe containing approximately 125k parameters is trained to decode frame-level pitch-class activations from the model's variational autoencoder latent space, using paired audio and MIDI data. At inference time, the frozen probe serves as a differentiable loss function: its gradient with respect to the denoising latent is used to nudge generation toward a user-specified pitch-class sequence, requiring no retraining or architectural modification of the base model. Across 27 evaluation trials spanning 9 text prompts and 3 target melodies, probe-guided generation increases melodic coherence by 2.4x over the unguided baseline (p < 1e-5, Wilcoxon signed-rank test), demonstrating that musically meaningful structure is both recoverable and steerable in diffusion-based music latent spaces.

Yushi Ye, Wilson Zheng, Yongyi Zang · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Atlas: Optimizing Deployment of Compound AI Workflows on Heterogeneous Clusters

Compound AI workflows are increasingly used to serve complex AI tasks by coordinating multiple AI models and software components. This approach enables deployment flexibility, as each workflow stage can expose different model variants and resource requirements, but it also expands the deployment choices. A deployment must choose an execution plan that selects AI models for each compound AI workflow stage and places them on a heterogeneous cluster in order to satisfy SLOs. Deployment optimizers therefore need estimates to compare many candidate plans and identify feasible ones. System metrics can often be profiled per stage and composed according to workflow topology, but accuracy cannot, as errors and information loss at upstream stages affect the accuracy of downstream stages. Existing approaches either profile complete configurations end to end, which scales poorly, or use product-based accuracy surrogates that treat stages as independent and can misrank candidate plans. We introduce Atlas, a framework for optimizing compound AI deployments under SLO constraints. Atlas uses MAP, a Markovian Accuracy Predictor, to estimate configuration accuracy from local conditional accuracy transitions between adjacent workflow stages. MAP discretizes intermediate outputs into accuracy buckets and composes transition profiles according to workflow topology, giving the optimizer an accuracy estimate without exhaustive end-to-end profiling. Atlas formulates execution-plan selection as a mixed-integer linear program that maximizes predicted accuracy subject to SLOs. Across four compound AI workflows, MAP achieves Spearman correlation up to 0.947 while reducing profiling cost by up to 2.6x relative to exhaustive end-to-end profiling. Guided by MAP, the Atlas optimizer selects execution plans within 0.03 of oracle accuracy while reducing deployment cost by up to 42% through heterogeneous placement.

Milos Gravara, Andrija Stanisic, Stefan Nastic · 0 citations
#artificial intelligence Preprint Open access Sep 2026

A Semantic Model of Genetic Evidence: A Step Toward Bridging the Basic-Science-Clinic Gap

Scientific and clinical decision-making depends on evidence from the primary literature, but existing standards for representing that evidence (FHIR Evidence, ECO, SEPIO, and the GA4GH Genomic Knowledge Standards) are oriented toward clinical-trial workflows, evidence codes, or single-variant assertions, and do not capture the fine-grained, domain-specific structure of claims in basic and pre-clinical research. We introduce a semantic model for scientific evidence with three core classes, specialize it for genetics, align it structurally to FHIR Evidence with a SEPIO-anchored credibility decomposition, and attach a compact dimensional vocabulary whose conditional-activation rules are validated by a SHACL schema for the implemented constraints. Using clinical variant interpretation as the driving use case, we evaluate the model through a human-AI annotation pilot over six genetics papers, yielding 28 evidence items and 95 source-anchored assertions, with a workflow that keeps curator-authored reference annotations distinct from AI-drafted annotations. Treating the pilot as a feasibility study rather than a benchmark, we argue that the model is a useful increment toward trustworthy, AI-ready infrastructure for variant interpretation: a reference data model and validation schema for representing genetic evidence.

Michael Bouzinier, Dmitry Etin · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Hakken: Predicting future discoveries to fill the gaps in today's knowledge

We present Hakken, a domain-agnostic prediction and explanation system performing knowledge prediction, i.e., growing scientific knowledge by establishing novel relationships, ones that are not limited to the deductive hull of previous knowledge. Hakken uses a transformer-based prediction model built on temporal sequences of knowledge graphs extracted from vast bodies of research publications, fused with an LLM's semantic knowledge, to predict the presence and define the type of as-yet undocumented relationships between scientific concepts. It then calls a model-agnostic explanation framework to provide accompanying information for each prediction that allows scientists to evaluate the suggested new relationship. While general purpose, we demonstrate Hakken's practical capabilities by applying it to the biomedical domain. There, Hakken's prediction model establishes a new benchmark for time-aware multi-label relation prediction, and we show that the model's output stays coherent and informative over extended time spans in historic data. In addition, we scored 1.5 million above-confidence-threshold hypotheses related to aging, qualitatively validated batches of these predictions with biologists and progressed three of them for empirical validation in wet-lab. Two predictions with potentially significant impact in the context of drug discovery and repurposing were confirmed, introducing previously undocumented interactions between TP53 and BAMBI, and between RAF1 and TNF, to biomedical science.

Tarek R. Besold, Uchenna Akujuobi, Pablo Sanchez et al. · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Towards Understanding Pause Token Fine-Tuning Dynamics: A Mode Retention Perspective

Pause-token methods improve LLM reasoning by inserting special tokens into sequences. Prior work explains these gains through computational expressivity. However, there is relatively little investigation into the training dynamics of pause tokens. We explore how pause tokens reshape the training dynamics of fine-tuning. Two controlled pilots expose distinct asymmetries. On a synthetic continual-learning task, masked pauses overwrite a previously-learned distribution roughly 4x less at matched final adaptation (H1, mode retention); on a synthetic math-reasoning probe, the boundary-adjacent token comes to encode substantially more downstream-step information (H2, non-myopic compression). We formalize a training rule consistent with both - Masked Boundary Pause (MBP), pause tokens placed at reasoning-step boundaries with their loss masked. Across 1B-8B Qwen and Llama models, MBP consistently improves reasoning, achieving gains of up to 6 points on math and 2.5 points on code, while preserving general language understanding abilities. We further demonstrate that this mode-preserving strategy extend gains to GRPO. These results recast pause tokens as a training-dynamics intervention on the retention-adaptation trade-off, rather than merely an inference-time computation device.

Jaehyeon Kim, Suhwan Kim, Nakyung Lee et al. · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Cultural Misalignment in Large Language Models: Detection, Measurement, and Mitigation Through Targeted Fine-Tuning

We evaluate three open-weight LLMs (Gemma3-12B from the USA, Bielik-11B-v3 from Poland, and Qwen3-4B from China) against World Values Survey Wave 7 data for 63 demographic personas across three countries, using normalized Wasserstein distance to quantify distributional misalignment. Contrary to expectations, no model favors its home country: the Chinese-built Qwen3-4B performs worst on its own Chinese population (W1 = 0.436, the highest misalignment in the entire model x country matrix). Targeted LoRA fine-tuning on the five worst-case personas, requiring fewer than 1,200 training pairs and under 15 minutes on a single GPU, reduces bias by 16.8% for Bielik-11B (p_Bonf = 0.002, d = -4.4) with all five targets improving. However, country-level decomposition reveals that fine-tuning redistributes rather than removes bias: Bielik's worst-case personas swap entirely from American to Chinese elderly, with zero overlap between pre- and post-correction sets. To our knowledge, this is the first study to target worst-case demographic personas with LoRA fine-tuning for cross-cultural bias mitigation.

Antoni Czolgowski, Abel Iyasele · 0 citations
#artificial intelligence Preprint Open access Sep 2026

Patterns of Priming in Production: Lexical, Semantic and Structural Alignment in Language Model Generation

This paper investigates structural priming in language model (LM) production, examining how preceding structural context influences sentence completion. While prior work has demonstrated priming effects in comprehension of structural alternations, it remained unclear whether these persist in production, where, when generating, an LM samples from many possible continuations at each step. We address this question through a series of controlled sentence-completion experiments on dative constructions. In line with prior work, we find that LMs are susceptible to structural priming, particularly in sentences that are semantically coherent. In terms of priming magnitude, we find that while there is a greater relative increase of double-object datives against our baselines, in line with inverse frequency effects, there is a larger absolute increase in prepositional-objects, the more frequently produced construction. Finally, we not only observe that structural priming is boosted by lexico-semantic coherence, but that structurally primed completions display greater levels of lexico-semantic repetition. Taken together, our evidence supports the view that structural priming in LMs operates across multiple levels of linguistic representation, facilitating, and facilitated by syntactic, lexical, and semantic alignment. Code: https://github.com/the-context-lab/primedproduction.

Giulia Pucci, Ruizhe Li, Arabella Sinclair · 0 citations

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