A chromosome-scale genome assembly for the K4-A7 cloned line of P. cynomolgi Berok is generated, establishing a high-resolution genomic foundation for comparative malaria biology, drug discovery, and the study of subtelomeric architecture, host adaptation, and lineage boundaries in primate Plasmodium.
This reference genome connects classical black fly cytogenetics with sequence-level analyses of genome organization, structural variation, and gene content, addressing a major genomic gap within Culicomorpha and providing a foundation for comparative studies of chromosome evolution, hematophagy, and vector biology acro...
E. Nishiduka, Tom Hill, Stephen Lu et al.· bioRxiv· 0 citations
Castilleja (Orobanchaceae) is a diverse, facultatively hemiparasitic plant genus characterized by a complex evolutionary history of reticulate evolution and significant taxonomic ambiguity. High-quality genomic resources have historically been limited, hindering robust macro-evolutionary and macro-ecological inquiries....
Ren N. Hamm, Jason Leung, Magdalene S. Lo et al.· bioRxiv· 0 citations
Fifteen near telomere-to-telomere (T2T) assemblies of Brazilian F. graminearum isolates generated with Oxford Nanopore sequencing provide a high-resolution resource for the global FHB community and a foundation for comparative analysis of a previously underrepresented population.
Erika Kroll, Ana K. M. Wood, Camilla P. Nicolli et al.· bioRxiv· 0 citations
The decaploid grass Thinopyrum ponticum (Th. ponticum, 2n = 10x = 70) is valuable for improving wheat resilience to biotic and abiotic stressors. However, the high level of ploidy and repetitive nature of its large genome present challenges for genome assembly. We used long-read sequencing and an iterative reassembly s...
Ping-Chuan Deng, Jing-Zhong Xie, Xuan-Zhao Li et al.· Molecular Plant· 0 citations
Coprinellus comprises mushroom-forming saprotrophic fungi that colonize decomposing plant-derived substrates, yet chromosome-complete genomic resources for this genus remain limited. To resolve chromosome architecture and lineage-specific evolution in this fungal group, we generated chromosome-complete assemblies of Co...
Ming-Han Yang, Wen-Yan Huo, Hao-Xuan Li et al.· Journal of Fungi· 0 citations
The common marmoset is a New World monkey (NWM) commonly used as a model organism to investigate questions in primate evolution and human disease, including Alzheimer’s and other neurodegenerative diseases, as well as neuropsychiatric disorders. Here we present the first telomere-to-telomere (T2T) reference genome for...
Prajna Hebbar, Tamara A. Potapova, Hailey Loucks et al.· bioRxiv· 0 citations
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