Recent advances in understanding dynamic changes in DNA methylation in plants exposed to a wide range of biotic threats are summarized, highlighting how pathogen interactions trigger DNA methylation changes that can either activate plant defense mechanisms or be manipulated by pathogens to promote host susceptibility.
Abstract
DNA methylation, a key epigenetic modification, is an important regulator of plant gene expression, coordinating development and responses to environmental signals. DNA methylation includes both cytosine methylation and adenine methylation. Cytosine methylation has been studied in plant immunity, while adenine methylation is emerging as a novel regulator. As part of its role in regulating gene expression, DNA methylation, so far mainly cytosine methylation, exhibits a dynamic behavior during biotic stresses. Indeed, several reports have explored the targets and regulatory capacity of DNA methylation-associated responses. This review summarizes recent advances in understanding dynamic changes in DNA methylation in plants exposed to a wide range of biotic threats, including viruses, fungi, oomycetes, bacteria, and insects, with examples on horticultural crops such as tomato, chrysanthemum, and citrus. We highlight how pathogen interactions trigger DNA methylation changes that can either activate plant defense mechanisms or be manipulated by pathogens to promote host susceptibility. We also discuss how pathogen effectors target host methylation machinery and the molecular basis of transgenerational epigenetic immune memory. Collectively, the evidences underscore DNA methylation as a critical battleground in plant-pathogen interactions across diverse plant species, pointing to its potential as a target for innovative crop improvement strategies.
This study examined the complex roles of epigenetic mechanisms—DNA methylation, histone modification, chromatin remodeling, and non-coding RNAs—in enhancing stress tolerance and regulating fruit quality traits.
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RATIONALE
Plants experience diverse biotic and abiotic stresses that can induce changes in DNA methylation. However, comparisons among existing studies are complicated by differences in analytical methods and experimental designs. We aimed to identify shared and stress-specific DNA methylation responses across studies....
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How specialized reader proteins and transcription factors interpret DNA methylation to preserve methylation patterns, recruit effector complexes, regulate chromatin accessibility and interact with parallel epigenetic systems to mediate transcriptional silencing and activation across mammals and plants is reviewed.
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