Sep 2026· Cytology and Genetics· Vol 60, pp. 463 - 472· 0 citations· 45 references
TL;DR
The findings highlight the genetic and evolutionary basis of productivity, adaptation, and resilience in Pandharpuri buffaloes and provide a foundational genomic resource to support future studies, including genome-wide association analyses and genomic selection for economically important traits.
Background: This study aimed to identify genomic regions under selection in Kangayam cattle of Tamil Nadu using a de-correlated composite of multiple signals (DCMS) framework. Methods: BovineHD SNP array data were retrieved from the WIDDE repository and the ICAR Krishi-Kosh portal. After quality control, autosomal SNPs...
Asad Khan, Ishmeet Kumar, Jayesh Vyas et al.· Indian Journal of Animal Res...· 0 citations
This study provides new insights into the pangenome of Magnaporthe oryzae and introduces a method for the identification of functionally important genes in fungal species.
Yi Wang, Qi Wu, Jin-bin Li et al.· Journal of Advanced Research· 0 citations
The findings suggest that adaptive, cell-mediated immune signaling rather than the innate/macrophage-centred mechanisms emphasized by existing bTB candidate gene panels may be a more productive avenue for future selection studies in Nili-Ravi buffalo, while underscoring the value of buffalo-native coordinate systems fo...
Atiq Ahmad, Abu Bakar, Sheikh Muhammad Laeeque et al.· bioRxiv· 0 citations
Lactiplantibacillus plantarum exhibits substantial strain-level genomic diversity that may contribute to variation in stress tolerance and functional properties. Five isolates recovered from spontaneously fermented red coffee cherries were analyzed by whole-genome resequencing and phenotypic characterization. Single-nu...
G. Tenea, Victor Cifuentes, Jazmin Hidalgo· International Journal of Mol...· 0 citations
Current dairy-cattle evidence indicates that pangenome-derived structural variants can substantially improve variant discovery and functional interpretation while yielding only marginal average gains in routine genomic prediction, favoring targeted augmentation rather than wholesale replacement of established SNP-based...
Diba Dedacha Jilo, B. Abebe, Waheed Ullah et al.· Functional & Integrative Gen...· 0 citations
The first draft genome assembly of the MHR genome is presented, providing a foundation to understand the genetic architecture underlying key phenotypic traits and identifying potential novel gene sources in MHR for rice improvement in the Caribbean region.
Uddesh M. Sahadeo, Omar Ali, A. Ramsubhag et al.· BioTech· 0 citations
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