2026· Methods in molecular biology· Vol 3069, pp.
13-32
· 0 citations
Medicine
TL;DR
Experimental strategies to identify UID degrons that mediate degradation by the catalytic 20S proteasome particle are described and an integrated workflow-spanning degron mapping to functional validation-provides a generalizable framework for uncovering ubiquitin-independent degrons.
This review compares midnolin-directed degradation with proteolysis-targeting chimeras and molecular glue degraders and identifies the design, delivery, and safety principles that will determine whether it becomes a useful ubiquitin-independent complement to existing degraders.
Yu-Wei Tang, Yin-Hao Zhou, Xin Zhang et al.· TIPS - Trends in Pharmacolog...· 0 citations
Combined genome-wide CRISPR knockout screening with base editor tiling screens at amino acid resolution reveal molecular rules governing HUWE1 phospho-degron recognition and identify a regulatory gate controlling substrate engagement and illustrate a generalizable strategy for resolving degradation mechanisms of undrug...
Keita Masuzawa, Kevin D. Dong, Calvin XiaoYang Hu et al.· Genes & Development· 0 citations
This study demonstrates that integrating ubiquitomics provides a superior sensitivity layer for PROTAC safety assessment, capable of uncovering mechanism-based liabilities that escape conventional global proteomic screening.
Hongtao Wen, Hui Liu, Jinfang Liu et al.· Analytical Chemistry· 0 citations
The UbiSite approach, a refined strategy for site-specific mapping of global ubiquitination using mass spectrometry-based proteomics, offers a robust and versatile platform for comprehensive ubiquitinome profiling with enhanced specificity and depth, enabling new insights into the regulatory roles of ubiquitin across d...
N. Pedersen, V. Akimov, Blagoy Spasov Blagoev· Methods in molecular biology· 0 citations
A non-canonical proteolytic function of USP5 is revealed, uncovering a previously unrecognised regulatory axis linking deubiquitinating enzymes to protein maturation, expanding the substrate repertoire for USP5 and providing a framework for identifying protease–substrate relationships in post-translational regulation.
Liam T. Hales, Paul M. Tammiste, Adam J. Walker et al.· Nature Communications· 1 citation
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