This protocol minimizes off-target editing, shortens experimental timelines, reduces screening workload, and provides a reliable platform for investigating resistance mechanisms, validating candidate genes, and supporting functional genomics studies in clinically relevant bacterial pathogens.
Chun Liu, Quan Zhang, Ke Ma
· Journal of Visualized Experi... · 0 citations
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Open access
Sep 2026
Species of Cronobacter are emerging foodborne pathogens that pose a significant threat to neonates. Functional genomic studies in Cronobacter have been hindered by the lack of efficient genetic manipulation tools. Here, we established a CRISPR/Cas9-based genome editing platform for Cronobacter. We developed a dual-plas...
Shu-Wei Yan, Jing Zhang, Yu-Fei Han et al.
· Pathogens · 0 citations
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Open access
Sep 2026
This work provides the first functional analysis of double-strand break repair in a chelicerate of T. urticae, and demonstrates that Polθ-deficient strains enhance incorporation of repair templates, even when mutations are distant from the cut site.
S. De Rouck, W. Dermauw, T. van Leeuwen
· iScience · 0 citations
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2026
This chapter outlines a comprehensive methodology for the design, assembly, and functional assessment of CRISPR/dCas9 systems optimized for tomato to investigate pathogen-associated responses.
Ananya Mukherjee, Shrabani Basak, Raghuvir Singh et al.
· Methods in molecular biology · 0 citations
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A one-step CRISPR-based transformation protocol developed in this study enables fast genome editing workflows with minimal hands-on time and demonstrates the versatility of the modified system for this industrially important genus.
Maximilian Hilkmann, Norma Welsch, M. F. Felle et al.
· Applied Microbiology and Bio... · 0 citations
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Open access
Aug 2026
The potential of these CRISPR-Cas9 systems to serve as a robust foundation for the functional genomics and metabolic engineering of A. limacinum is demonstrated.
Kai Tomita, Yuji Nishida, D. Matsumoto et al.
· Scientific Reports · 0 citations
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